SeuratData数据集-包含了各种常用的公共数据

devtools::install_github('satijalab/seurat-data')#安装
InstallData("pbmc3k")#安装数据集

    ?pbmc3k
    ?ifnb

Dataset Version Summary species system ncells tech notes Installed InstalledVersion
cbmc.SeuratData cbmc 3.0.0 scRNAseq and 13-antibody sequencing of CBMCs human CBMC (cord blood) 8617 CITE-seq TRUE 3.0.0
hcabm40k.SeuratData hcabm40k 3.0.0 40,000 Cells From the Human Cell Atlas ICA Bone Marrow Dataset human bone marrow 40000 10x v2 FALSE 3.0.0
ifnb.SeuratData ifnb 3.0.0 IFNB-Stimulated and Control PBMCs human PBMC 13999 10x v1 TRUE 3.0.0
panc8.SeuratData panc8 3.0.0 Eight Pancreas Datasets Across Five Technologies human Pancreatic Islets 14892 SMARTSeq2, Fluidigm C1, CelSeq, CelSeq2, inDrops TRUE 3.0.0
pbmc3k.SeuratData pbmc3k 3.0.0 3k PBMCs from 10X Genomics human PBMC 2700 10x v1 TRUE 3.0.0
pbmcsca.SeuratData pbmcsca 3.0.0 Broad Institute PBMC Systematic Comparative Analysis human PBMC 31021 10x v2, 10x v3, SMARTSeq2, Seq-Well, inDrops, Drop-seq, CelSeq2 HCA benchmark FALSE 3.0.0